BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036E04LP1|AL430238
(931 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1042 1134 0.0
3x_Contig1574 637 0.0
>3x_Contig1042
Length = 3616
Score = 1134 bits (571), Expect = 0.0
Identities = 579/581 (99%), Gaps = 1/581 (0%)
Strand = Plus / Minus
Query: 352 agaaagagcactgaagatagctatgagagaccgaacgccgatgatcgcgggcttactcga 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3611 agaaagagcactgaagatagctatgagagaccgaacgccgatgatcgcgggcttactcga 3552
Query: 412 gggtcttgacacgcacctctacgtatatcgatatttatgtgtgcctgtttcattctttat 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3551 gggtcttgacacgcacctctacgtatatcgatatttatgtgtgcctgtttcattctttat 3492
Query: 472 ggtgtaagcctctaaatttcataaacagctcaaaaccaaaaaatatatttagtaatggaa 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3491 ggtgtaagcctctaaatttcataaacagctcaaaaccaaaaaatatatttagtaatggaa 3432
Query: 532 acgttaacatttgaacgaaccaacccttttaagaaacttggtatgcagaggccacaaact 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3431 acgttaacatttgaacgaaccaacccttttaagaaacttggtatgcagaggccacaaact 3372
Query: 592 catcaaagcagccatatttgagtgttactcgagggtagtagagtttactgagattatcta 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3371 catcaaagcagccatatttgagtgttactcgagggtagtagagtttactgagattatcta 3312
Query: 652 cgcggcgagtatgtctgagcattcggaattcgtagccggaagtggcgttggcaggagcca 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3311 cgcggcgagtatgtctgagcattcggaattcgtagccggaagtggcgttggcaggagcca 3252
Query: 712 agatgaagtcggtggatcttcctcagtgactttgtctccttcacaatcgcagtcgcagct 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3251 agatgaagtcggtggatcttcctcagtgactttgtctccttcacaatcgcagtcgcagct 3192
Query: 772 gcaaacacagccagaaaccgaatcttcaagagctgatgatgtggaaacagggacaacttc 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3191 gcaaacacagccagaaaccgaatcttcaagagctgatgatgtggaaacagggacaacttc 3132
Query: 832 gtcgtcttctagactgcaccagatgaatgggcagtt-cmacaacatttgaactttgttgc 890
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 3131 gtcgtcttctagactgcaccagatgaatgggcagttccaacaacatttgaactttgttgc 3072
Query: 891 ccgaaagttcaatatattagatagactgtttagaggcggca 931
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 3071 ccgaaagttcaatatattagatagactgtttagaggcggca 3031
>3x_Contig1574
Length = 8021
Score = 637 bits (321), Expect = 0.0
Identities = 353/363 (97%), Gaps = 1/363 (0%)
Strand = Plus / Minus
Query: 1 gatcttggggatatcccaaaaacgtgccgtcaactacttccaacaacaactttgcctgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gatcttggggatatcccaaaaacgtgccgtcaactacttccaacaacaactttgcctgga 420
Query: 61 ggtattgatgttggtccaagtacgttatcgttccagccatcaactagagtcgaatattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ggtattgatgttggtccaagtacgttatcgttccagccatcaactagagtcgaatattta 360
Query: 121 gacagagctaaagcaactccaaaacaagaattccaacaggaagtaagaaactcatcagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gacagagctaaagcaactccaaaacaagaattccaacaggaagtaagaaactcatcagca 300
Query: 181 tgcagagttattatgcacgacgttgggaaatctttactcgtcactataaagctaccaaag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 299 tgcagagttattatgcacgacgttgggaaatctttactcgtcactataaagctaacaaag 240
Query: 241 gcgaagacaaccattcaatgagtaattcgctatatatatatatatgtrcatatgtattta 300
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 239 gcgaagacaaccattcaatgagtaattcgctatatatatataaaaaaacatatgtattta 180
Query: 301 tgtggtaccacctgtaacaattttaagaaatactatgataaataagctagaagaaagagc 360
||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 179 tgtggta-caactgtaacaattttaagaaatactatgataaataagctagaacaaacagc 121
Query: 361 act 363
|||
Sbjct: 120 act 118
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9741
Number of Sequences: 1807
Number of extensions: 9741
Number of successful extensions: 1019
Number of sequences better than 1.0e-20: 2
length of query: 931
length of database: 10,358,551
effective HSP length: 16
effective length of query: 915
effective length of database: 10,329,639
effective search space: 9451619685
effective search space used: 9451619685
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)